Immunocytochemistry of motor neurons derived from iPSCs with the hNIL construct protocol

Maria Sckaff, Bruce Conklin, Claire D Clelland, Carissa Feliciano, Zachary Nevin

Published: 2022-05-17 DOI: 10.17504/protocols.io.6qpvr68bovmk/v1

Abstract

This protocol describes the immunocytochemistry for staining motor neurons derived from induced pluripotent stem cells (iPSCs) using the hNIL transgenic factors in a CLYBL safe harbor site. For the protocol on this differentiation, refer to the Clelland Lab’s Differentiation of iPSCs with the hNIL construct into motor neurons protocol.

Attachments

Steps

Immunocytochemistry of the hNIL motor neurons: Day 1: Fixing, Permeabilizing, Blocking and Coating Cells with Primary Antibody

1.

Note
This protocol can be followed at any time after Day 7 in the hNIL differentiation of iPSCs into motor neurons protocol. This protocol has been optimized to neurons plated on 96-well plates.
Without removing media from the wells, add 4% PFA on all target wells and let it sit for 0h 30m 0s at Room temperature (the volume of 4% PFA should equal the volume of media already in the well, resulting in a final well concentration of 2% PFA).

2.

Discard the media and PFA by carefully and gently tapping the plate upside down onto absorbent wipes (KIMTECH Kimwipes are appropriate). Discard the Kimwipes in designated PFA waste.

Note
If fixing and staining need to be performed on separate days, after step 2, wash the plate thrice with 1X DPBS, 0h 10m 0s each time at slow agitation on the Belly Dancer. Then store the plate at 4°C, with the sides covered by parafilm to avoid evaporation. Only permeabilize the cells (step 3) on the day that the cells will be incubated with primary antibody.

3.

Wash cells with 1X DPBS + 0.1% Triton-X (“DPBS-T” at 100µL per well) to permeabilize the cells.

3.1.

Briefly wash cells with 1X DPBS + 0.1% Triton-X (“DPBS-T” at 100µL per well). Discard the spent wash onto absorbent wipes. (1/3)

3.2.

Wash cells with 1X DPBS + 0.1% Triton-X (“DPBS-T” at 100µL per well) for 0h 10m 0s at slow agitation on the Belly Dancer. Discard the spent wash onto absorbent wipes. (2/3)

3.3.

Wash cells with 1X DPBS + 0.1% Triton-X (“DPBS-T” at 100µL per well) for 0h 10m 0s at slow agitation on the Belly Dancer. Discard the spent wash onto absorbent wipes. (3/3)

4.

Block the target wells with 1X DPBS-T + 5% BSA at 4Room temperature for 1h 0m 0s (50µL/well).

Note
Do not exceed this time to avoid over blocking your neurons.

5.

Discard blocking agent onto an absorbent wipe, then add primary antibodies diluted in 1X DPBS-T + 5% BSA (50µL/well) at the appropriate concentrations.

Note
It is advisable to include the beta tubulin monoclonal primary antibody (1:250 from ThermoFisher Scientific Catalog # 480011) to show neuronal morphology.

6.

Incubate at 4°C 1h 0m 0s on a plate shaker, with the sides covered by parafilm to avoid evaporation.

Immunocytochemistry of the hNIL motor neurons: Day 2: Coating Cells with Secondary Antibody

7.

Discard the primary antibody solution from each well using a multichannel pipette.

Note
Ensure to never touch the bottom of the well and always pipette slowly to not lift neurons from the well bottom.

8.

Wash with 1X DPBS-T to remove any unbound primary antibody (100µL/well). First briefly, then twice for 10 minutes each time at slow agitation on the Belly Dancer.

8.1.

Wash with 1X DPBS-T briefly. (1/3)

8.2.

Wash with 1X DPBS-T for 0h 10m 0s at slow agitation on the Belly Dancer. (2/3)

8.3.

Wash with 1X DPBS-T for 0h 10m 0s at slow agitation on the Belly Dancer. (3/3)

9.

Add desired secondary antibodies diluted in 1X DPBS-T + 5% BSA. Incubate at4Room temperature for 1h 0m 0s in the belly dancer.

10.

Wash once briefly with 1X DPBS-T (100µL/well).

11.

Wash with 1X DPBS-T with DAPI (1:1000-1:10,000) for 0h 10m 0s (100 μL/well).

12.

Wash with 1X DPBS (100 μL/well).

12.1.

Wash with 1X DPBS for 0h 10m 0s. (1/2)

12.2.

Wash with 1X DPBS for 0h 10m 0s. (2/2)

13.

Change the media to 1X DPBS or 1X DPBS + Sodium Azide 0.02%, if storing long term, (100µL/well) and store at 4°C.

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