DToL Taxon-specific Standard Operating Procedures for Marine Metazoa
Chris Fletcher, Inez Januszczak, Kesella Scott-Somme, Patrick Adkins, John Bishop, Nova Mieszkowska , Rebekka Uhl, Freja Azzopardi, Dominic Phillips
SOP
Marine Metazoa Working Group
Darwin Tree of Life Project
Marine Biological Association
Natural History Museum
Standard Operating Procedure
DNA barcoding
whole genome sequencing
Anthozoa
Bivalvia
Cephalopoda
Bryozoa
Chitons
Ascidiacea
Crustacea
Echinodermata
Gastropoda
Medusozoa
Ctenophora
Polychaeta
Porifera
Pycnogonida
Sipuncula
Abstract
These Standard Operating Procedures (SOPs) contain guidance on how to process the various taxa that fall under the ‘Marine Metazoa’ category within the scope of the Darwin Tree of Life (DToL) project. The guidance specifically refers to the tissue samples needed for DNA barcoding (which takes place at the Natural History Museum (NHM) and at the Marine Biological Association (MBA)) and outlines the dissected tissues required for whole genome sequencing, which takes place at the Wellcome Sanger Institute. Every specimen is submitted for DNA barcoding first before potentially being sent to the Wellcome Sanger Institute. These SOPs were assembled by sampling team members from the Other Metazoa Working Group for the Darwin Tree of Life project, with contributions from experts from the Natural History Museum and the Marine Biological Association.
Please see the Guidelines for more details on how to best use these SOPs, as well as for relevant contact information and acknowledgements.
The available SOPs are listed below. Please note more may be added in future:
1- Anthozoa
2- Bivalvia
3 - Bryozoa
4 - Chitons
5 - Cephalopoda
6 - Colonial Ascidiacea
7.1 - Crustacea - Decapoda
7.2 - Crustacea - Peracarida
7.3 - Crustacea - Cirripedia
8 - Echinodermata
9 - Gastropoda
10 - Medusozoa and Ctenophora
11 - Polychaeta
12 - Porifera
13 - Pycnogonida
14 - Sipuncula
15 - Unitary Ascidiacea