Chlamydomonas reinhardtii nuclear transformation by electroporation.

João Vitor Molino

Published: 2021-09-10 DOI: 10.17504/protocols.io.bx5cpq2w

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Abstract

This protocols describe the steps required for nuclear transformation of Chlamydomonas reinhardtii by electroporation.

Here you can find a video following the protocol.

Before start

Prepare a ice bucket * Separate cuvettes, keep them on ICE

  • Allow linearized vectors to melt
  • Keep transformation buffer on ICE/Fridge
  • Prepare 50 mL centrifugal tubes with 10 mL TAP medium for recover stage

Steps

DNA Preparation

1.

Digest a large enough amount of plasmid. The goal is to have a concentrated digested sample in the range of 250-700 ng/uL.

  1. Select the appropiate enzymes for linearization. Usually, restrictions sites in flanking position to the expression cassete.
  2. Mix all components for digestion 40µg . Digest for 6h 0m 0s at 37°C .
  3. Column purify digestion (Avoid gel purify, since vector backbone may helps to prevent intracelular DNAses action). * Use a PCR purification kit to purify the digestion reaction.
  4. Quantitate by absorbance measurement (i.e. Nanodrop).
AB
ComponentAmount
10X Cutsmart NEB6.0 uL
XbaINEB 20 U/uL
KpnI HFNEB 20 U/uL
Plasmid 1219.9 ng/uL40 uL
ddH20, Molecular grade8.0 uL

Typical reaction setup

Citation
Result example0.641µg/µL 30µL 19.230µg

Cells preparation

2.

Aseptically inoculate 250mL with wild type cells. Either by scrappeing cells of a plate with a inocculating loop or from a previous cultured cells.1. Incubate at 25°C , under constant shaking (~150-180 RPM) and light (60-80 µmols de photons/m2s) until a cell density from 3x 10^6 cells/mL to 6x 10^6 cells/mL is reached. Pellet cells in centrifuge tubes. Separate culture in sufficient amount of sterile 50mL centrifuge tubes or larger volume tubes, and centrifuge for 2000x g,25°C.  

Pellet Cells
Pellet Cells
  1. Genttly ressupend cells at 3-6-108 cells/mL 8 cells/mL in Transformation Buffer.

Citation
Culture at 3x106 cells/mL usually yield 12-13 transformations.

Transformation

3.

Add cutted vector to the bottom of the electroporation cuvette. Typically from 250ng to 1000ng Add 250µL (at approximatelly 3x 10^8 cells/mL) to each cuvette. Pippet up and down on DNA sample. Flick cuvette to mix DNA and cells. Shake cells to the bottom of the cuvette. Also add no DNA control (Elution buffer or water).

Cell suspension ready for electroporation
Cell suspension ready for electroporation
  1. Incubate cells with DNA On ice for 0h 10m 0s
  2. Wipe cuvette (to remove condensated water) and electroporate (Table Electroporation).
  3. Let it recover for 0h 10m 0s on the cuvette
  4. Add cells to 10mL inside sterile 50mL centrifuge tubes. Gently transfer cells from cuvette to TAP/40 mM sucrose. Rinse cubette with TAP/40 mM sucrose to transfer any remaining cells. Incubate at Room temperature on rocker or shaker at 50 rpm ambient light.
Recover step of cells in shaker, low mixing.
Recover step of cells in shaker, low mixing.
  1. Pellet cells by centrifuging for 2000x g,25°C
  2. Aseptically poor off supernatant. Add 300µL to pelet. Gently re-suspend cells and pipette onto 2 plates with appropriate antibiotics. ie. 200µL per plate, and let it dry a,septically without plate cover.
  3. Spread cells evenly over the plate with a innoculation loop. Avoid spreading to the borders.
  4. Use parafilm to block evaporation and place plates under constant light (60 µmols de photons/m2s), 25°C. Colonies should be visible in 5-7 days.

Table Electroporation - Settings

AB
Voltage800 V
Time Constant20 ms
Cuvette gap4 mm

Equipment

ValueLabel
Gene Pulser Xcell Electroporation SystemsNAME
ElectroporatorTYPE
BioradBRAND
1652660SKU

Typical output after electroporation

ABCD
Time constant (ms)Voltage (V)Capacitance (uF)Resistance ( Ohms)
20.178850650
20.478950600
19.878950550

Citation
Green colonies should appear in the plate as in the pictures below.

Positive result
Positive result
Negative control
Negative control

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