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Mime-seq 2.0: a method to sequence microRNAs from specific mouse cell types

作者

Ariane Mandlbauer, Qiong Sun, Niko Popitsch, Tanja Schwickert, Miroslava Spanova, Jingkui Wang, Stefan Ameres, Meinrad Busslinger, Luisa Cochella

发布时间 2024-05-03

The description of precise miRNA expression patterns is crucial to understand what these small RNAs contribute to animal development and physiology. High-throughput sequencing of miRNAs from individual developmental stages has provided insight into temporal regulation but often lacks the cellular resolution to link miRNA-function to the biology of distinct cell types within complex tissues. Here, we provide a protocol for microRNome by methylation-dependent sequencing for mice (mime-seq 2.0). Mime-seq takes advantage of a chemical small RNA-tagging approach followed by chemo-selective, high-throughput sequencing that enables the identification of tissue- and cell type-specific miRNA profiles in animals in a sensitive and reproducible manner.

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Ultra-deep ATAC-seq for sorted neurons

作者

Andrea Kriz, Alisa Mo

发布时间 2024-04-23

Isolation of neurons from frozen post-mortem human brain tissue and preparation of ATAC-seq libraries for ultra-deep sequencing and somatic mutation detection.

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Electrophysiological recording from Brain Slices Protocol

作者

HaiDun

发布时间 2024-04-16

This protocol details the steps for performing slice electrophysiological recordings with DART.

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